Bioafrica home page Laboratory for Clinical and Evolutionary Virology home page

BioAfrica HHV8 Automated Subtying Tool (Version 2.0)


This tool is in the process of being published and until the manuscript is available, please cite the following paper:


An Automated Genotyping System for Analysis of HIV-1 and other Microbial Sequences.
T. de Oliveira,K. Deforche, S. Cassol, M. Salminem, D. Paraskevis, C. Seebregts, J. Snoeck, E. J. van Rensburg ,A. M. J. Wensing, D.A. van de Vijver, C. A. Boucher , R. Camacho , and A-M Vandamme.
Bioinfomatics 2005; 21 (19), 3797-3800.




Submit sequences
 How to cite
 HHV8 Tutorials
 HHV8 Decision Trees
 HHV8 Subtyping Process
 HHV8 Example Sequences
 Contact us
Developed by: Taryn Page, Sharon Cassol, Andrew Rambaut and Tulio de Oliveira

Developed in cooperation with the Evolutionary Biology Group at University of Oxford, UK, HIV-1 Immunopathogenesis and Therapeutics Program at University of Pretoria, South Africa.

Funded by the Marie Curie Fellowship,  Wellcome Trust and the Royal Society, UK.

Suggestions or problems on the program please contact:  Dr Tulio de Oliveira.